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Table 2 Differential taxa abundances between two groups at phylum level

From: Alterations in the gut microbiota of patients with silica-induced pulmonary fibrosis

 

Healthy subjects(A)

Patients with silicosis(B)

P value

Q value

Mean

Variance

SE

Mean

Variance

SE

Phylum

 Firmicutes

0.329

0.0274

0.039

0.472

0.0170

0.0284

0.004

0.04

 Actinobacteria

0.009

0.0004

0.004

0.001

0

0

0.0008

0.04

Family

 Veillonellaceae

0.0298

0.00248

0.0117

0.102

0.0168

0.0283

0.027

0.0753

 Lachnospiraceae

0.136

0.014

0.0279

0.227

0.0172

0.0286

0.034

0.0887

 Enterobacteriaceae

0.169

0.0447

0.0498

0.0777

0.00641

0.0175

0.0849

0.19

 Enterococcaceae

0.0102

0.00171

0.0097

0.00005

0

0

0.169

0.297

 Bacteroidaceae

0.324

0.0431

0.0489

0.272

0.0318

0.0389

0.42

0.559

 Clostridiales_vadinBB60_group

0.0003

0.00000

0.0003

0

0

0

0.000999

0.00405

 Leptotrichiaceae

0

0

0

0.00004

0

0

0.00099

0.00405

 Succinivibrionaceae

0

0

0

0.00019

0

0.00019

0.00099

0.00405

 Bradyrhizobiaceae

0.0002

0

0.0001

0

0

0

0.016

0.0518

 Streptococcaceae

0.0043

0.00006

0.0019

0.00067

0

0.00022

0.02

0.0622

genus

 Devosia

0.0000147

0

0

0

0

0

0

0.00037

 Ruminofilibacter

0.000014

0

0

0

0

0

0

0.00041

 Bosea

0.000013

0

0

0

0

0

0

0.00044

 Jatrophihabitans

0.0000131

0

0

0

0

0

0

0.00044

 uncultured_bacterium_f_Blastocatellaceae_

0.0000145

0

0

0

0

0

0

0.00148

 uncultured_bacterium_f_JTB255_marine_benthic_group

0

0

0

0

0

0

0

0.00216

 Anaeroglobus

0.0000134

0

0

0

0

0

0.00013

0.00317