From: Alterations in the gut microbiota of patients with silica-induced pulmonary fibrosis
 | Healthy subjects(A) | Patients with silicosis(B) | P value | Q value | ||||
---|---|---|---|---|---|---|---|---|
Mean | Variance | SE | Mean | Variance | SE | |||
Phylum | ||||||||
 Firmicutes | 0.329 | 0.0274 | 0.039 | 0.472 | 0.0170 | 0.0284 | 0.004 | 0.04 |
 Actinobacteria | 0.009 | 0.0004 | 0.004 | 0.001 | 0 | 0 | 0.0008 | 0.04 |
Family | ||||||||
 Veillonellaceae | 0.0298 | 0.00248 | 0.0117 | 0.102 | 0.0168 | 0.0283 | 0.027 | 0.0753 |
 Lachnospiraceae | 0.136 | 0.014 | 0.0279 | 0.227 | 0.0172 | 0.0286 | 0.034 | 0.0887 |
 Enterobacteriaceae | 0.169 | 0.0447 | 0.0498 | 0.0777 | 0.00641 | 0.0175 | 0.0849 | 0.19 |
 Enterococcaceae | 0.0102 | 0.00171 | 0.0097 | 0.00005 | 0 | 0 | 0.169 | 0.297 |
 Bacteroidaceae | 0.324 | 0.0431 | 0.0489 | 0.272 | 0.0318 | 0.0389 | 0.42 | 0.559 |
 Clostridiales_vadinBB60_group | 0.0003 | 0.00000 | 0.0003 | 0 | 0 | 0 | 0.000999 | 0.00405 |
 Leptotrichiaceae | 0 | 0 | 0 | 0.00004 | 0 | 0 | 0.00099 | 0.00405 |
 Succinivibrionaceae | 0 | 0 | 0 | 0.00019 | 0 | 0.00019 | 0.00099 | 0.00405 |
 Bradyrhizobiaceae | 0.0002 | 0 | 0.0001 | 0 | 0 | 0 | 0.016 | 0.0518 |
 Streptococcaceae | 0.0043 | 0.00006 | 0.0019 | 0.00067 | 0 | 0.00022 | 0.02 | 0.0622 |
genus | ||||||||
 Devosia | 0.0000147 | 0 | 0 | 0 | 0 | 0 | 0 | 0.00037 |
 Ruminofilibacter | 0.000014 | 0 | 0 | 0 | 0 | 0 | 0 | 0.00041 |
 Bosea | 0.000013 | 0 | 0 | 0 | 0 | 0 | 0 | 0.00044 |
 Jatrophihabitans | 0.0000131 | 0 | 0 | 0 | 0 | 0 | 0 | 0.00044 |
 uncultured_bacterium_f_Blastocatellaceae_ | 0.0000145 | 0 | 0 | 0 | 0 | 0 | 0 | 0.00148 |
 uncultured_bacterium_f_JTB255_marine_benthic_group | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.00216 |
 Anaeroglobus | 0.0000134 | 0 | 0 | 0 | 0 | 0 | 0.00013 | 0.00317 |